Upcoming Events

Dissertation Defense -
Suwash Silwal
Date: Tuesday, July 28, 2026
Time: 9:00 - 12:00 p.m.
Location: Fisher Hall 325
Advisor: Dr. Xiao Zhang
Zoom: https://michigantech.
Title: Bayesian Analysis of Nominal Outcomes with Missing Values Using Multinomial and Multivariate Multinomial Probit Models
Abstract:Nominal outcomes frequently arise in health sciences, transportation, economics,
market research, and related fields. These data often contain missing values, while
longitudinal and panel studies generate multiple correlated nominal responses. Bayesian
estimation of multinomial probit (MNP) and multivariate multinomial probit (MMNP)
models provides a flexible framework for analyzing such data but remains computationally
challenging due to high-dimensional likelihood integration, restrictive covariance
identification constraints, and poor mixing of Markov chain Monte Carlo (MCMC) algorithms,
particularly in the presence of missing data. This dissertation develops parameter-expanded
data augmentation (PX-DA) methods for MNP and MMNP models with missing nominal outcomes
by incorporating parameter expansion into the data augmentation framework. The proposed
methods relax restrictive identification constraints and substantially improve the
convergence and mixing of MCMC algorithms while preserving the target posterior distribution.
Chapter 2 develops a Bayesian PX-DA algorithm for univariate multinomial probit (MNP)
models with missing nominal outcomes under ignorable missing-data mechanisms. Chapter
3 extends the proposed algorithm to MMNP models for correlated nominal outcomes, providing
an efficient Bayesian estimation framework that accommodates both outcome dependence
and missing data. The proposed methods are evaluated through extensive simulation
studies under different missing-data mechanisms and are further illustrated using
the Mental Health Client-Level Data (MH-CLD) and the Health and Retirement Study (HRS).
The performance of the algorithms is compared with existing Bayesian approaches, including
Metropolis–Hastings (MH) and standard Gibbs sampling (GS), using convergence diagnostics,
mixing behavior, estimation accuracy, and computational efficiency.
Results from simulation and real-data analyses demonstrate that the proposed parameter-expanded
algorithms improve convergence, mixing, and computational efficiency while maintaining
accurate parameter estimation under different levels of missingness. By addressing
key computational and methodological challenges in Bayesian estimation of multinomial
probit models, this dissertation expands the practical applicability of both univariate
and multivariate MNP models and provides an efficient computational framework for
the Bayesian analysis of nominal data with missing values.

Dissertation Defense -
Stephen Acheampong
Date: Friday, July 31, 2026
Time: 9:00 - 12:00 p.m.
Location: Fisher Hall 325
Advisor: Dr. Xiao Zhang
Zoom: https://michigantech.
Title: Bayesian Analysis for Longitudinal Binary and Ordinal Data with Missing Values Using Multivariate Probit Model
Abstract: Longitudinal binary and ordinal outcomes are common in medicine, epidemiology, and
the social sciences, where repeated measurements are often incomplete because of nonresponse,
missed visits, or dropout. Bayesian multivariate probit models provide a flexible
framework for correlated discrete outcomes but are computationally demanding under
identifiable formulations. This dissertation develops efficient parameter-expanded
Bayesian methods for incomplete longitudinal binary and ordinal data.
For both binary and ordinal outcomes, the proposed framework can estimate regression
and correlation parameters; the ordinal model additionally estimates cut-points. Missing
responses are assumed for missing completely at random and missing at random. Simulation
studies are conducted to demonstrate the proposed methods. We also apply our methods
to health insurance coverage and life satisfaction data from the Panel Study of Income
Dynamics.
Parameter expansion improves computational efficiency for both binary and ordinal
models, with the proposed Gibbs sampling methods providing the superior overall performance.
These results demonstrate that parameter-expanded multivariate probit models are effective
tools for analyzing incomplete longitudinal discrete data.
PhD Dissertations
2026
Shuo Sun
Statistics
Statistical learning methods for gene regulatory network analysis and fracture risk
prediction
Advisor: Kui Zhang
Yi Xu
Statistics
Change Point Analysis In High-Dimensional Data Using Random Projections
Advisor: Yeonwoo Rho
2025
Hunter Waldron
Mathematical Sciences (Discrete Math)
The Combinatorics of Integer Partitions Enumerated by some Exotic Weights
Advisor: William Keith
MD Mutasim Billah
Statistics
Methods in Statistics, Machine Learning, and Deep Learning for Combining Multi-Omics
Dataset
Advisor: Kui Zhang
Megh Raj Subedi
Statistics
Novel Statistical Method for Multiple Phenotype and Gene Based Association Tests
Advisor: Quiying Sha
Kazeem Abiodun Kareem
Statistics
Hybrid Mixtures of Factor Analyzers for High Dimensional Data
Advisor: Fan Dai
Jehyun Lee
Mathematical Sciences (Discrete Math)
On Graph Decompositions: Exploring the Stars and Stripes Problem With Odd n-Stars
Advisor: Melissa Keranen
Meiling Zhou
Statistics
Statistical Methods for Joint Analysis of Multiple Types of Phenotypes in Genetic
Studies
Advisor: Kui Zhang
Karlee Westrem
Mathematical Sciences (Discrete Math)
Schaper Numbers, Palindrome Partitions, and Symmetric Functions, with applications
to characters of the symmetric group
Advisor: David Hemmer
2024
Sunyoung Ahn
Computational Science & Engineering
Bayesian Inference of Longitudinal Binary and Ordinal Data Utilizing Multivariate
Probit Models
Advisor: Xiao Zhang
Zazil Santizo Huerta
Mathematical Sciences (Discrete Math)
On Graph Decompositions and Designs: Exploring the Hamilton-Waterloo Problem With
a Factor of 6-Cycles and Projective Planes of Order 16
Advisor: Melissa Keranen
Kyle Schwiebert
Mathematical Sciences (Computational / Applied Math)
LES-C Turbulence Models and Fluid Flow Modeling: Analysis and Application to Incompressible
Turbulence and Fluid-Fluid Interaction
Advisor: Alexander Labovsky
Lirong Zhu
Statistics
Statistical Methods for Genetic Association Studies and Polygenic Risk Score Prediction
Advisor: Quiying Sha
Fangyao Zhu
Mathematical Sciences (Computational / Applied Math)
Bound preserving discontinuous Galerkin Methods for Euler equations and nonequilibrium
flows
Advisor: Yang Yang
Praveen T. W. Hettige
Statistics
An Incremental Multiscale Non–Linear Manifold Approximation Method
Advisor: Benjamin Ong
Yue Kang
Mathematical Sciences (Computational / Applied Math)
Discontinuous Galerkin methods for compressible miscible displacements and applications
in reservoir simulation
Advisor: Yang Yang
2023
Xiaoqing Gao
Statistics
Machine Learning Methods for Prediction of Human Infectious Virus and Imputation of
HLA Alleles
Advisor: Kui Zhang
Meida Wang
Statistics
Statistical Methods for GWAS and the Impact of Diabetic Medication Adherence on Healthcare
Costs
Advisor: Qiuying Sha
Yasasya Batugedara Mohottalalage
Mathematical Sciences (Computational / Applied Math)
Higher Accuracy Models and Validation of LES-C Turbulence Models
Advisor: Alexander Labovsky
Xuewei Cao
Statistics
Statistical Methods for Gene Selection and Genetic Association Studies
Advisor: Quiying Sha
Xing Ling
Statistics
Additive P-Value Combination Test
Advisor: David Hemmer
Jacob Blazejewski
Mathematical Sciences (Computational / Applied Math)
Novel Approaches to Compute Manifold Operators with the Radial Basis Functions Method
Advisor: Cécile Piret
2022
Hongjing Xie
Statistics
Statistical Method of Genetic Association Studies
Advisor: Qiuying Sha
Shijia Yan
Statistics
Statistical Methods for Controlling Population Stratification and Gene-Based Association
Studies
Advisor: Shuanglin Zhang
2021
Yanfang Liu
Mathematical Sciences (Computational / Applied Math)
Deterministic and Statistical Methods for Inverse Problems with Partial Data
Advisor: Jiguang Sun
Cheng Gao
Statistics
Statistical Methods In Genetic Studies
Advisor: Kui Zhang
Nadun Lakshitha Dissanayake Kulasekera Mudiyanselage
Mathematical Sciences (Computational / Applied Math)
New Numerical Approximations of Geological Processes in Heterogeneous Systems using
Radial Basis Functions
Advisor: Cécile Piret
Tim Wagner
Mathematical Sciences (Discrete Math)
Integer Partitions Under Certain Finiteness Conditions
Advisor: Fabrizio Zanello
2020
Zhongyuan Hu
Statistics
Novel Gene-Based Association Test Based on New Polygenetic Risk Scores and Real Data
Analysis Using UK Biobank COPD Data
Advisor: Shuanglin Zhang
Dilek Erkmen
Mathematical Sciences (Computational / Applied Math)
High Accuracy Methods for Fluid Flows in Various Applications: Theory and Implementation
Advisor: Alexander Labovsky
Daniel Crane
Mathematical Sciences (Computational / Applied Math)
The Singular Value Expansion for Compact and Non-Compact Operators
Advisor: Mark Gockenbach
Joy Azzam
Mathematical Sciences (Computational / Applied Math)
Sub-Sampled Matrix Approximations
Advisor: Allan Struthers
Co-Advisor: Benjamin Ong
2019
Ruihao Huang
Mathematical Sciences (Computational / Applied Math)
Novel Computational Methods for Eigenvalue Problems
Advisor: Jiguang Sun
Lilia Feng
Mathematical Sciences (Statistics)
Bayesian Hypothesis Testing in Linear Regression Models
Advisor: Min Wang
Yun Liu
Statistics
Statistical Methods for Mixed Frequency Data Sampling Models
Advisor: Yeonwoo Rho
Duo Zhang
Mathematical Sciences (Statistics)
Bayesian Analysis for the Intraclass Model and for the Quantile Semiparametric Mixed-Effects
Double Regression Models
Advisor: Min Wang
Sulin Wang
Mathematical Sciences (Computational / Applied Math)
Total Variation Bounded Flux Limiters for High Order Finite Difference Schemes Solving
Scalar Conservation Laws
Advisor: Zhengu Xu
Matthew Roberts
Mathematical Sciences (Computational / Applied Math)
Approximation of the Generalized Singular Value Expansion
Advisor: Mark Gockenbach
Nattaporn Chuenjarern
Mathematical Sciences (Computational / Applied Math)
Discontinuous Galerkin Methods for Convection-Diffusion Equations and Applications
in Petroleum Engineering
Advisor: Yang Yang
Xueling Li
Statistics
Statistical Methods for Joint Analysis of Multiple Phenotypes and their Applications
for PheWAS
Advisor: Qiuying Sha
2018
Mustafa Aggul
Mathematical Sciences (Computational / Applied Math)
High Accuracy Methods and Regularization Techniques for Fluid Flows and Fluid-Fluid
Interaction
Advisor: Alexander Labovsky
Samuel Judge
Mathematical Sciences (Discrete Math)
On the Density of the Odd Values of the Partition Function
Advisor: Fabrizio Zanello
Zhenchuan Wang
Mathematical Sciences (Statistics)
Joint Analysis for Multiple Traits
Advisor: Shuanglin Zhang
Co-Advisor: Qiuying Sha
Xinlan Yang
Mathematical Sciences (Statistics)
Statistical Methods for Detecting Causal Rare Variants and Analyzing Multiple Phenotypes
Advisor: Qiuying Sha
Xiaoyu Liang
Mathematical Sciences (Statistics)
Joint Analysis of Multiple Phenotypes in Association Studies
Advisor: Shuanglin Zhang
Co-Advisor: Qiuying Sha
Huanhuan Zhu
Mathematical Sciences (Statistics)
Statistical Methods for Analyzing Multivariate Phenotypes and Detecting Rare Variant
Associations
Advisor: Qiuying Sha
Co-Advisor: Shuanglin Zhang
2017
Ala Mahmood Nahar Al Zaalig
Mathematical Sciences (Computational / Applied Math)
Direct Sampling Methods for Inverse Scattering Problems
Advisor: Jiguang Sun
Bryan Freyberg
Mathematical Sciences (Discrete Math)
Distance Magic-Type and Distance Antimagic-Type Labelings of Graphs
Advisor: Melissa Keranen
Co-Advisor: Dalibor Froncek
Mustafa Gezek
Mathematical Sciences (Discrete Math)
Combinatorial Problems Related to Codes, Designs and Finite Geometries
Advisor: Vladimir Tonchev
Samer Alokaily
Mathematical Sciences (Computational / Applied Math)
Modeling and Simulation of the Peristaltic Flow of Newtonian and Non-Newtonian Fluids
with Application to the Human Body
Advisor: Kathleen Feigl
Co-Advisor: Franz Tanner
Olabanji Shonibare
Mathematical Sciences (Computational / Applied Math)
Numerical Simulation of Viscoelastic Multiphase Flows Using an Improved Two-phase
Flow Solver
Advisor: Kathleen Feigl
Co-Advisor: Franz Tanner
2016
Adrian Pastine
Mathematical Sciences (Discrete Math)
Two Problems of Gerhard Ringel
Advisor: Donald Kreher
Co-Advisor: Melissa Keranen
Chao Liang
Mathematical Sciences (Computational / Applied Math)
Computational Methods for the Investigation of Liquid Drop Phenomena in External Gas
Flows
Advisor: Kathleen Feigl
Co-Advisor: Franz Tanner
MS Theses and Reports
2024
Cody McCarthy
Mathematical Sciences (Computational / Applied Math)
New Method for Computing the Euclidean Condition Number with RIM-C
Advisor: Jiguang Sun
Vivian Anyanwu
Statistics
A Longitudinal Exploration of the Dynamics in Marijuana Consumption Patterns Using
Mixed Effects Models and Generalized Estimating Equations (GEE)
Advisor: Xiao Zhang
Kristoffer Larsen
Statistics
Deep Learning, Multi-Staged Machine Learning, and Reinforcement Learning to Improve
Cardiac Resynchronization Therapy
Advisor: Qiuying Sha
Co-Advisor: Weihua Zhou
2022
Siyu Wang
Statistics
Multiple Testing Correction in Time Series Rolling Window Analysis with Application
of GWAS Methods
Advisor: Yeonwoo Rho
2021
Emily Anible
Mathematical Sciences (Discrete Math)
Major Index over Descent Distributions of Standard Young Tableaux
Advisor: William Keith
Tessa Kriz
Statistics
Construction and Analysis of Genetic Regulatory Networks with RNA-SEQ Data from Arabidopsis
thaliana
Advisor: Kui Zhang
Kyle Schwiebert
Mathematical Sciences (Computational / Applied Math)
Improving the Temporal Accuracy of Turbulence Models and Resolving the Implementation
Issues of Fluid Flow Modeling
Advisor: Alexander Labovsky
Weibing Li
Statistics
Imputation of Ordinal Responses Using Univariate Bayesian Probit Model
Advisor: Xiao Zhang
2020
Prangya Rani Parida
Mathematical Sciences (Discrete Math)
Uniform Three-Class Regular Partial Steiner Triple Systems with Uniform Degrees
Advisor: Melissa Keranen
2019
Dhruv Dhanesh Thanawala
Mathematical Sciences (Computational / Applied Math)
Credit Risk Analysis using Machine Learning and Neural Networks
Advisor: Benjamin Ong
Co-Advisor: Gowtham Shankara
Dale Bigler
Mathematical Sciences (Discrete Math)
Universal Central Extensions of Direct Limits of Hom-Lie Superalgebras
Advisor: Jie Sun
Eric Neubert
Mathematical Sciences (Discrete Math)
Some Results on Partial Difference Sets and Partial Geometries
Advisor: Zeying Wang
Ziyao Xu
Mathematical Sciences (Computational / Applied Math)
High Order Bound-Preserving Discontinuous Galerkin Methods and their Applications
in Petroleum Engineering
Advisor: Yang Yang
2018
Xiaoqing Gao
Statistics
Survival Analysis and Comparison of Anatomic and Clinical Prognostic Stage Groups
for Breast Cancer Based on 2803 Cases
Advisor: Kui Zhang
Sachithra Perera
Mathematical Sciences (Statistics)
Literature Review for Predicting 30-Day Hospital Readmission
Advisor: Qiuying Sha
Melinda Kleczynksi
Mathematical Sciences (Computational / Applied Math)
Pseudo-Companion Matrices for Polynomial Systems
Advisor: Allan Struthers
Fadhila Yosof
Mathematical Sciences (Statistics)
CUR Matrix Decompositions Method for Joint Analysis of Multiple Phenotypes
Advisor: Qiuying Sha
2017
Qiuchen Hai
Mathematical Sciences (Statistics)
On the Equivalence Between Bayesian and Frequentist Nonparametric Hypothesis Testing
Advisor: Jianping Dong
Mitchell Tahtinen
Mathematical Sciences (Statistics)
Analysis of Data from a Study to Identify Potential Biomarkers to Indicate Renal Injury
Advisor: Kui Zhang
Teresa Woods
Mathematical Sciences (Statistics)
Analysis of Aleks Mathematics Placement Test Data
Advisor: Shari Stockero
Co-Advisor: Yeonwoo Rho
Joshua Davies
Mathematical Sciences (Discrete Math)
Distribution of Permutation Statistics Across Pattern Avoidance Classes, and the Search
for a Denert-Associated Condition Equivalent to Pattern Avoidance
Advisor: William Keith
2016
Amanda Stenzelbarton
Mathematical Sciences (Math Education)
Understanding the Transition from Secondary Education Mathematics to Undergraduate
Mathematics
Advisor: Sheri Stockero
Anna Pascoe
Mathematical Sciences (Math Education)
Learning to Notice and Use Student Thinking in Undergraduate Mathematics Courses
Advisor: Sheri Stockero
Dilek Erkmen
Mathematical Sciences (Computational / Applied Math)
Defect-Deferred Correction Method for the Two-Domain Convection-Dominated Convection-Diffusion
Problem
Advisor: Alexander Labovsky
Mustafa Aggul
Mathematical Sciences (Computational / Applied Math)
A High Accuracy Minimally Invasive Regularization Technique for Navier-Stokes Equations
at High Reynolds Number
Advisor: Alexander Labovsky
Henriette Groenvik
Mathematical Sciences (Statistics)
A Self-Normalizing Approach to the Specification Test of Mixed Frequency Models
Advisor: Yeonwoo Rho
Joseph Reath
Mathematical Sciences (Statistics)
Improved Parameter Estimation of the Log-Logistic Distribution with Applications
Advisor: Min Wang
Shengnan Li
Mathematical Sciences (Statistics)
Objective Bayesian Analysis of a Generalized Lognormal Distribution
Advisor: Min Wang
